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This Web site serves the DrugBank data in a structured format according to the Linked Data principles. The data is published under a Creative Common's Attribution-NonCommercial 4.0 International License. More information about the original dataset and the dataset usage can be found on DrugBank.ca.

This dataset is part of the Linking Open Drug Data (LODD) project. More information on the project and the approach for publishing the data can be found in the original research paper: Jentzsch, Anja, et al. "Linking Open Drug Data." I-SEMANTICS. 2009.

Note: The last update of the dataset has been done in 2011, thus it doesn't contain any recent updates in the original DrugBank.ca data.

The database can be accessed using:

  1. Your plain old web browser
  2. Semantic Web browsers
  3. SPARQL clients.

We ask that users who download significant portions of the database cite the DrugBank paper in any resulting publications. Citing DrugBank: Wishart DS, Knox C, Guo AC, Shrivastava S, Hassanali M, Stothard P, Chang Z, Woolsey J. DrugBank: a comprehensive resource for in silico drug discovery and exploration. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D668-72.

Commercial users can inquire about a commercial license here.

1. HTML View

You can use the navigation links at the top of this page to explore the database.

2. RDF View

You can also explore this database with Semantic Web browsers like Tabulator or Disco. To start browsing, open this entry point URL in your Semantic Web browser:

http://wifo5-04.informatik.uni-mannheim.de/drugbank/all

3. SPARQL Endpoint

SPARQL clients can query the database at this SPARQL endpoint:

http://wifo5-04.informatik.uni-mannheim.de/drugbank/sparql

The database can also be explored using this AJAX-based SPARQL Explorer.

Current Status

Number of triples: 765,936
Number of drugs: 4,772
Number of RDF links to other Linked Data sources: 59,661

Links to: DBpedia, LinkedCT, DailyMed, Diseasome, and Bio2RDF's CAS, ChEBI, GeneID, HGNC, IUPAC, KEGG Compound, KEGG Drug, PDB, PFAM, and SwissProt.

Download dump: N-Triples (BZip2)

FU Berlin, Web-based Systems Group     Linking Open Data Community Project